Electron detachment dissociation (EDD) pathways in oligonucleotides
نویسندگان
چکیده
منابع مشابه
Backbone and side-chain cleavages in electron detachment dissociation (EDD).
Ab-initio electronic structure methods are used to explore potential energy profiles pertinent to the fragmentations of gas-phase radicals thought to be formed in the new negative-ion mode EDD mass spectroscopic studies of peptides. Barriers to fragmentation as well as the associated overall energy differences are computed for the observed Calpha-C backbone bond cleavage as well as for side-cha...
متن کاملElectron detachment dissociation of glycosaminoglycan tetrasaccharides.
The first application of electron detachment dissociation (EDD) to carbohydrates is presented. The structural characterization of glycosaminoglycan (GAG) oligosaccharides by mass spectrometry is a longstanding problem because of the lability of these acidic, polysulfated carbohydrates. Doubly-charged negative ions of four GAG tetrasaccharides are examined by EDD, collisionally activated dissoci...
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The structural characterization of glycosaminoglycans (GAG) oligosaccharides has been a long-standing challenge in the field of mass spectrometry. In this work, we present the application of electron detachment dissociation (EDD) Fourier transform mass spectrometry to the analysis of dermatan sulfate (DS) oligosaccharides up to 10 residues long. The EDD mass spectra of DS oligosaccharides were ...
متن کاملElectron Detachment Dissociation and Infrared Multiphoton Dissociation of Heparin Tetrasaccharides.
Heparin glycosaminoglycans (GAGs) present the most difficult glycoform for analytical characterization due to high levels of sulfation and structural heterogeneity. Recent contamination of the clinical heparin supply and subsequent fatalities has highlighted the need for sensitive methodologies of analysis. In the last decade, tandem mass spectrometry has been increasingly applied for the analy...
متن کاملElectron capture dissociation, electron detachment dissociation and infrared multiphoton dissociation of sucrose octasulfate.
The structural analysis of sulfated carbohydrates such as glycosaminoglycans (GAGs) has been a long- standing challenge for the field of mass spectrometry. The dissociation of sulfated carbohydrates by collisionally- activated dissociation (CAD) or infrared multiphoton dissociation (IRMPD), which activate ions via vibrational excitation, typically result in few cleavages and abundant SO(3) loss...
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ژورنال
عنوان ژورنال: International Journal of Mass Spectrometry
سال: 2009
ISSN: 1387-3806
DOI: 10.1016/j.ijms.2009.03.012